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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932188.1_cds_XP_016478779.1_70389
CDS Infomation

[gene=LOC107800137] [db_xref=GeneID:107800137] [protein=protein CUP-SHAPED COTYLEDON 2-like] [protein_id=XP_016478779.1] [location=complement(join(42852..43391,44040..44323,44638..44818))] [gbkey=CDS]
Sequence

ATGGAGAACTACCAGCATTTCGACTGCAGTGATGGGAATTTACCCCCTGGTTTTAGGTTC
CATCCAACTGATGAAGAACTCATCACCTACTACCTACTGAAGAAGGTTCTTGACGGCAAC
TTTACTGCTCGAGCAATTGCTGAAGTTGACCTCAACAAATGCGAGCCCTGGGAGCTGCCT
GGGAAAGCCAAGATGGGAGAAAAAGAGTGGTACTTTTTCAGCCTACGTGATCGGAAGTAT
CCAACGGGGCTGAGAACTAACAGAGCTACTGAGGCTGGTTACTGGAAAGCTACAGGGAAA
GACAGGGAGATTTACAGCTCAAAGACTTGTGCACTTGTGGGCATGAAGAAAACCCTAGTT
TTCTACCGAGGTAGGGCTCCTAAAGGAGAGAAGAGCAACTGGGTTATGCATGAATATCGC
CTTGATGGCAAATTTGCCTATCACTACATCTCAAGAAGTTCTAAGGACGAGTGGGTAATT
TCAAGGGTCTTTCAGAAGAATGGTTCCTCTGTCGGTGCCAATTCAAATGGTGGCAAGAAA
AGGTTAAGTTCCAGTATCAACATGTATCAAGAAGTAAGTTCACCGTCCTCTGTTTCTCAG
CTTCCACCGCTCCTTGATTCCTCTCCTTACAGCACCACTGCCACTTCTGCTGTCATTAAT
GCTGATCGTGAGAGCTTCAGAAAGGAGCACGTGCCCTGTTTCTCCACAACTGCTACGCAC
AGTTTCGACCCAAGTTCTGTCTTTAGCATTTCGTCGAACAGCCTGCATGCACTGCCACCT
CCTAGTTTCAGTGCCATTCTTGACTCTTCCACTAATTTTGCCCACTACACAAGGAACTCA
ACTTTTCCCAGCTTAAGGTCACTCCATGAGAATCTGCAGCTTCCGTTATTTTCCAGTGGA
GCTCCGGCCATGCACAGCGGTTTTCCTGCTCCAATGGACAACTGGCCGGTGCCGGAGACT
CAGAAAGTTGAACAGTCTGAACTTGATTGCATGTGGAGTTACTGA

Peptide Sequence

PEP ID

XP_016478779.1
PEP Infomation

PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Nicotiana tabacum]
Sequence

MENYQHFDCSDGNLPPGFRFHPTDEELITYYLLKKVLDGNFTARAIAEVDLNKCEPWELP
GKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCALVGMKKTLV
FYRGRAPKGEKSNWVMHEYRLDGKFAYHYISRSSKDEWVISRVFQKNGSSVGANSNGGKK
RLSSSINMYQEVSSPSSVSQLPPLLDSSPYSTTATSAVINADRESFRKEHVPCFSTTATH
SFDPSSVFSISSNSLHALPPPSFSAILDSSTNFAHYTRNSTFPSLRSLHENLQLPLFSSG
APAMHSGFPAPMDNWPVPETQKVEQSELDCMWSY

Transcript Sequence

Gene sequence data has not been registered.